Pseudomonas sp. RW405

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. RW405 is a bacterial strain characterized by having a single replicon, which indicates a streamlined genomic organization. This strain is cataloged under the accession number QHJD00000000.1, representing its sequence data in biological databases. The presence of a single replicon may suggest a specific adaptation or evolutionary advantage for Pseudomonas sp. RW405, potentially influencing its metabolic capabilities and environmental resilience. Pseudomonas species are known for their versatility in various ecological niches, often thriving in diverse environments due to their ability to utilize a wide range of organic compounds. This trait can provide insights into the ecological roles of Pseudomonas sp. RW405, especially in bioremediation processes or in the degradation of pollutants. The ability to adapt and flourish in challenging environments highlights the potential of this strain in applications related to environmental microbiology and biotechnology. Understanding the genomic structure and capabilities of Pseudomonas sp. RW405 can lead to further exploration of its utility in sustainable practices and its role within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. RW405
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. RW405
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. RW405 NODE_94_LENGTH_470_COV_107.072342, whole

Gene Summary

Adenine Count

1115399 bp

Thymine Count

1120834 bp

Guanine Count

1818214 bp

Cytosine Count

1807139 bp

Genome Length

5862946 bp

Protein-coding Genes

5210 genes

Non-Coding Genes

232 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
paraquat-inducible protein aDK184_03275Not AvailableNegative649524 - 65018324478.5
tyrosine--trna ligaseDK184_03295Not AvailableNegative655997 - 65719644290.4
hypothetical proteinDK184_03300Not AvailablePositive657312 - 6574133906.83
peptidase m23DK184_03305Not AvailablePositive657410 - 65883151368.3
anhydro-n-acetylmuramic acid kinaseDK184_03310Not AvailablePositive658835 - 65992638354.1
iron-sulfur cluster insertion protein erpaDK184_03315Not AvailableNegative659986 - 66033612517.5
n-acetyl-gamma-glutamyl-phosphate reductaseDK184_03320Not AvailableNegative660484 - 66151836247.9
protoporphyrinogen oxidase hemjDK184_03325Not AvailablePositive661661 - 66208616509.7
nitronate monooxygenaseDK184_03330Not AvailablePositive662115 - 66307133689.7
sdr family nad(p)-dependent oxidoreductaseDK184_03335Not AvailablePositive663139 - 66392128710.4

Displaying genes 861 – 870 of 5442 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.