Pseudomonas sp. RW405

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. RW405 is a bacterial strain characterized by having a single replicon, which indicates a streamlined genomic organization. This strain is cataloged under the accession number QHJD00000000.1, representing its sequence data in biological databases. The presence of a single replicon may suggest a specific adaptation or evolutionary advantage for Pseudomonas sp. RW405, potentially influencing its metabolic capabilities and environmental resilience. Pseudomonas species are known for their versatility in various ecological niches, often thriving in diverse environments due to their ability to utilize a wide range of organic compounds. This trait can provide insights into the ecological roles of Pseudomonas sp. RW405, especially in bioremediation processes or in the degradation of pollutants. The ability to adapt and flourish in challenging environments highlights the potential of this strain in applications related to environmental microbiology and biotechnology. Understanding the genomic structure and capabilities of Pseudomonas sp. RW405 can lead to further exploration of its utility in sustainable practices and its role within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. RW405
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. RW405
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. RW405 NODE_94_LENGTH_470_COV_107.072342, whole

Gene Summary

Adenine Count

1115399 bp

Thymine Count

1120834 bp

Guanine Count

1818214 bp

Cytosine Count

1807139 bp

Genome Length

5862946 bp

Protein-coding Genes

5210 genes

Non-Coding Genes

232 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidoglycan editing factor pgefDK184_03140Not AvailableNegative623131 - 62387126356.4
23s rrna pseudouridine(1911/1915/1917) synthase rludDK184_03145Not AvailableNegative623868 - 62483035257.8
outer membrane protein assembly factor bamdDK184_03150Not AvailablePositive624978 - 62599738397.9
hypothetical proteinDK184_03155Not AvailablePositive626092 - 6263228736.61
fadr family transcriptional regulatorDK184_03160Not AvailablePositive626589 - 62735328857.7
branched-chain amino acid abc transporter substrate-binding proteinDK184_03165Not AvailablePositive627444 - 62864643323.9
branched-chain amino acid abc transporter permeaseDK184_03170Not AvailablePositive628712 - 62957230518.8
branched-chain amino acid abc transporter permeaseDK184_03175Not AvailablePositive629574 - 63059336106.6
abc transporter atp-binding proteinDK184_03180Not AvailablePositive630593 - 63134527436.2
abc transporter atp-binding proteinDK184_03185Not AvailablePositive631345 - 63204025756.5

Displaying genes 831 – 840 of 5442 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.