Pseudomonas sp. RW405

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. RW405 is a bacterial strain characterized by having a single replicon, which indicates a streamlined genomic organization. This strain is cataloged under the accession number QHJD00000000.1, representing its sequence data in biological databases. The presence of a single replicon may suggest a specific adaptation or evolutionary advantage for Pseudomonas sp. RW405, potentially influencing its metabolic capabilities and environmental resilience. Pseudomonas species are known for their versatility in various ecological niches, often thriving in diverse environments due to their ability to utilize a wide range of organic compounds. This trait can provide insights into the ecological roles of Pseudomonas sp. RW405, especially in bioremediation processes or in the degradation of pollutants. The ability to adapt and flourish in challenging environments highlights the potential of this strain in applications related to environmental microbiology and biotechnology. Understanding the genomic structure and capabilities of Pseudomonas sp. RW405 can lead to further exploration of its utility in sustainable practices and its role within microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. RW405
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. RW405
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. RW405 NODE_94_LENGTH_470_COV_107.072342, whole

Gene Summary

Adenine Count

1115399 bp

Thymine Count

1120834 bp

Guanine Count

1818214 bp

Cytosine Count

1807139 bp

Genome Length

5862946 bp

Protein-coding Genes

5210 genes

Non-Coding Genes

232 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribdDK184_02080Not AvailableNegative428569 - 42969939579.9
transcriptional regulator nrdrDK184_02085Not AvailableNegative429702 - 43018118381.2
hypothetical proteinDK184_02090Not AvailablePositive430273 - 43071915820.2
methyltransferaseDK184_02095Not AvailablePositive430723 - 43137924196.8
thioredoxinDK184_02100Not AvailablePositive431411 - 43228331822.2
hypothetical proteinDK184_02105Not AvailableNegative432601 - 43294512355.8
duf2796 domain-containing proteinDK184_02110Not AvailablePositive433076 - 43365720510.9
abc transporter atp-binding proteinDK184_02115Not AvailablePositive433658 - 43436825591.8
abc transporter permeaseDK184_02120Not AvailablePositive434368 - 43563345811.1
duf3299 domain-containing proteinDK184_02130Not AvailablePositive435760 - 43627218839.9

Displaying genes 631 – 640 of 5442 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.