Pseudomonas sp. RIT411

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. RIT411 is a bacterial species characterized by a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and gene expression. This species is cataloged under the accession QBIZ00000000.2, which provides a reference point for researchers interested in its genetic and functional properties. Pseudomonas species are known for their versatility and ability to thrive in diverse environments, which can include soil, water, and even as plant pathogens. The single replicon of Pseudomonas sp. RIT411 may contribute to its adaptability and survival in various ecological niches. This trait suggests a potential for a specialized metabolic capability, which is often a hallmark of Pseudomonas species, enabling them to utilize a wide range of organic compounds. In ecological terms, the presence of Pseudomonas sp. RIT411 in its habitat may play a significant role in nutrient cycling and biodegradation processes. Pseudomonas species are frequently involved in the breakdown of organic pollutants, thus contributing to environmental bioremediation efforts. The genetic information encoded within its single replicon could provide insights into its metabolic pathways and ecological interactions. Understanding the traits of Pseudomonas sp. RIT411 may inform future research on its potential applications in biotechnology or environmental science, particularly in the context of bioremediation and sustainable practices. This emphasizes the importance of studying microbial diversity and the functional roles these organisms play in their ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. RIT411
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. RIT411
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. RIT411 37, whole genome shotgun sequence.

Gene Summary

Adenine Count

891683 bp

Thymine Count

894025 bp

Guanine Count

1743069 bp

Cytosine Count

1746801 bp

Genome Length

5275578 bp

Protein-coding Genes

4714 genes

Non-Coding Genes

188 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
general stress proteinDBY63_002920Not AvailableNegative634819 - 6349775399.0
mbl fold metallo-hydrolaseDBY63_002925Not AvailableNegative635253 - 63611632016.9
gtra family proteinDBY63_002930Not AvailablePositive636141 - 63669819886.6
glycosyltransferaseDBY63_002935Not AvailablePositive636707 - 63763634954.5
cell division protein zapeDBY63_002940Not AvailableNegative637633 - 63873340553.9
pyridoxal phosphate-dependent aminotransferaseDBY63_002945Not AvailablePositive638893 - 64011344156.0
sigma-54-dependent fis family transcriptional regulatorDBY63_002955Not AvailableNegative641097 - 64243447557.3
sensor histidine kinaseDBY63_002960Not AvailableNegative642419 - 64386451435.2
mandelate racemase/muconate lactonizing enzyme family proteinDBY63_002965Not AvailableNegative643937 - 64508842444.9
mfs transporterDBY63_002970Not AvailableNegative645113 - 64647148942.5

Displaying genes 761 – 770 of 4902 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.