Ruminococcaceae bacterium R-25

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Oscillospiraceae

Genus

Description

Ruminococcaceae bacterium R-25 is characterized by having two replicons, which suggests a complex genomic structure potentially advantageous for its adaptability and function within its ecological niche. The organism is classified under the family Ruminococcaceae, known for its role in the fermentation of plant materials in the gut of herbivores. The genome of Ruminococcaceae bacterium R-25 is represented by two distinct accessions: QGFZ00000000.1 and UHJI00000000.1. These accessions provide a basis for understanding the genomic features and biological functions of the bacterium, although specific traits and functionalities associated with these sequences are not detailed in the provided data. Ruminococcaceae species are often associated with the degradation of complex carbohydrates, contributing to the digestion and fermentation processes in their hosts. This capability highlights the bacterium's potential role in nutrient cycling and its significance in the gut microbiome, particularly in herbivorous animals. Understanding the traits of Ruminococcaceae bacterium R-25 may offer insights into its ecological role in the digestive systems of herbivores, emphasizing the importance of microbial communities in nutrient assimilation and energy production from fibrous plant materials. The presence of multiple replicons may enhance its adaptability to fluctuating environmental conditions, further contributing to its ecological significance.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Ruminococcaceae bacterium strain R-25 genome assembly, contig:

Gene Summary

Adenine Count

853217 bp

Thymine Count

838844 bp

Guanine Count

696180 bp

Cytosine Count

679320 bp

Genome Length

3067561 bp

Protein-coding Genes

2712 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
energy-coupling factor transport system permease proteinSAMN06297423_0962Not AvailableNegative1092316 - 109301125812.9
dna-3-methyladenine glycosylase iiiSAMN06297423_0963Not AvailableNegative1093013 - 109360921503.4
atp-binding cassette, subfamily bSAMN06297423_0964Not AvailableNegative1093625 - 109536163967.1
atp-binding cassette, subfamily bSAMN06297423_0965Not AvailableNegative1095354 - 109713565121.2
ferrous iron transport protein aSAMN06297423_0966Not AvailablePositive1097390 - 10976027503.6
ferrous iron transport protein aSAMN06297423_0967Not AvailablePositive1097633 - 10978548153.2
ferrous iron transport protein bSAMN06297423_0968Not AvailablePositive1097970 - 110039087565.3
virus attachment protein p12 family proteinSAMN06297423_0969Not AvailablePositive1100403 - 11005826323.87
transglutaminase-like superfamily proteinSAMN06297423_0970Not AvailableNegative1100814 - 110187539879.2
signal transducer regulating beta-lactamase production, contains metallopeptidase domainSAMN06297423_0971Not AvailableNegative1101953 - 110374967315.1

Displaying genes 951 – 960 of 5520 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.