Pseudomonas sp. 31-12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. 31-12 is characterized by having a single replicon, which is significant for its genetic stability and replication efficiency. The genomic data for this strain is accessible through the accession number NZ_CP029482.1, allowing for further exploration and analysis of its genetic composition. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse environments, which often include soil, water, and plant surfaces. This adaptability makes them important players in various ecological niches, contributing to nutrient cycling and organic matter decomposition. The genomic characteristics of Pseudomonas sp. 31-12, particularly its single replicon, may influence its ecological roles and interactions within its habitat. Such traits can affect its adaptability to environmental changes and its capacity to engage in biogeochemical processes. Understanding the specific genetic makeup of Pseudomonas sp. 31-12 through its genomic accession could provide insights into its potential applications in biotechnology, such as bioremediation or agricultural enhancement. In summary, Pseudomonas sp. 31-12, with its single replicon and documented genomic sequence, exemplifies the ecological importance of Pseudomonas species. They play significant roles in maintaining ecosystem health and function, underlining the need for continued research into their biological capabilities and environmental interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. 31-12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. 31-12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. 31-12


Gene Summary

Adenine Count

1381659 bp

Thymine Count

1372932 bp

Guanine Count

1985324 bp

Cytosine Count

1990338 bp

Genome Length

6730253 bp

Protein-coding Genes

6096 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pp2c family protein-serine/threonine phosphataseDJ564_RS00260Not AvailableNegative50934 - 5166226331.3
type vi secretion system membrane subunit tssmDJ564_RS00265Not AvailableNegative51662 - 55201133905.0
type ivb secretion system protein icmh/dotuDJ564_RS00270Not AvailableNegative55215 - 5609033105.9
type vi secretion system baseplate subunit tsskDJ564_RS00275Not AvailableNegative56096 - 5742749632.6
type vi secretion system lipoprotein tssjDJ564_RS00280Not AvailableNegative57430 - 5793018352.8
type vi secretion system-associated fha domain protein taghDJ564_RS00285Not AvailableNegative57936 - 5913244552.5
type vi secretion proteinDJ564_RS00290Not AvailableNegative59150 - 592905060.16
sigma-54 interaction domain-containing proteinDJ564_RS00300Not AvailableNegative59615 - 6113255616.0
type vi secretion system atpase tsshDJ564_RS00305Not AvailableNegative61143 - 6379196144.6
type vi secretion system baseplate subunit tssgDJ564_RS00310Not AvailableNegative63805 - 6481238612.3

Displaying genes 81 – 90 of 6211 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.