Pseudomonas sp. 31-12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. 31-12 is characterized by having a single replicon, which is significant for its genetic stability and replication efficiency. The genomic data for this strain is accessible through the accession number NZ_CP029482.1, allowing for further exploration and analysis of its genetic composition. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse environments, which often include soil, water, and plant surfaces. This adaptability makes them important players in various ecological niches, contributing to nutrient cycling and organic matter decomposition. The genomic characteristics of Pseudomonas sp. 31-12, particularly its single replicon, may influence its ecological roles and interactions within its habitat. Such traits can affect its adaptability to environmental changes and its capacity to engage in biogeochemical processes. Understanding the specific genetic makeup of Pseudomonas sp. 31-12 through its genomic accession could provide insights into its potential applications in biotechnology, such as bioremediation or agricultural enhancement. In summary, Pseudomonas sp. 31-12, with its single replicon and documented genomic sequence, exemplifies the ecological importance of Pseudomonas species. They play significant roles in maintaining ecosystem health and function, underlining the need for continued research into their biological capabilities and environmental interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. 31-12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. 31-12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. 31-12 chromosome, complete genome.

Gene Summary

Adenine Count

1381659 bp

Thymine Count

1372932 bp

Guanine Count

1985324 bp

Cytosine Count

1990338 bp

Genome Length

6730253 bp

Protein-coding Genes

6096 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nfed family proteinDJ564_RS01805Not AvailableNegative398267 - 39879718264.9
aminoacyl-trna deacylaseDJ564_RS01810Not AvailablePositive398996 - 39945717059.4
duf2789 domain-containing proteinDJ564_RS01815Not AvailablePositive399595 - 3998409130.79
type ii toxin-antitoxin system phd/yefm family antitoxinDJ564_RS01820Not AvailablePositive399986 - 4002318909.81
type ii toxin-antitoxin system rele family toxinDJ564_RS01825Not AvailablePositive400221 - 40050210951.4
hypothetical proteinDJ564_RS01830Not AvailableNegative400519 - 4007016774.81
marr family winged helix-turn-helix transcriptional regulatorDJ564_RS01835Not AvailablePositive400894 - 40132215660.0
fusc family proteinDJ564_RS01840Not AvailablePositive401319 - 40339176587.7
duf1656 domain-containing proteinDJ564_RS01845Not AvailablePositive403388 - 4035977851.06
hlyd family secretion proteinDJ564_RS01850Not AvailablePositive403594 - 40448132853.4

Displaying genes 381 – 390 of 6211 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.