Pseudomonas sp. 31-12

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. 31-12 is characterized by having a single replicon, which is significant for its genetic stability and replication efficiency. The genomic data for this strain is accessible through the accession number NZ_CP029482.1, allowing for further exploration and analysis of its genetic composition. Pseudomonas species are known for their metabolic versatility and ability to thrive in diverse environments, which often include soil, water, and plant surfaces. This adaptability makes them important players in various ecological niches, contributing to nutrient cycling and organic matter decomposition. The genomic characteristics of Pseudomonas sp. 31-12, particularly its single replicon, may influence its ecological roles and interactions within its habitat. Such traits can affect its adaptability to environmental changes and its capacity to engage in biogeochemical processes. Understanding the specific genetic makeup of Pseudomonas sp. 31-12 through its genomic accession could provide insights into its potential applications in biotechnology, such as bioremediation or agricultural enhancement. In summary, Pseudomonas sp. 31-12, with its single replicon and documented genomic sequence, exemplifies the ecological importance of Pseudomonas species. They play significant roles in maintaining ecosystem health and function, underlining the need for continued research into their biological capabilities and environmental interactions.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. 31-12
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. 31-12
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. 31-12 chromosome, complete genome.

Gene Summary

Adenine Count

1381659 bp

Thymine Count

1372932 bp

Guanine Count

1985324 bp

Cytosine Count

1990338 bp

Genome Length

6730253 bp

Protein-coding Genes

6096 genes

Non-Coding Genes

115 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nitrate/nitrite transporterDJ564_RS10430Not AvailableNegative2235849 - 223706042629.7
antar domain-containing response regulatorDJ564_RS10435Not AvailableNegative2237300 - 223787521580.4
cmpa/nrta family abc transporter substrate-binding proteinDJ564_RS10440Not AvailableNegative2237891 - 223910244125.4
quinone-dependent dihydroorotate dehydrogenaseDJ564_RS10445Not AvailablePositive2239334 - 224035335695.4
ribosome modulation factorDJ564_RS10450Not AvailableNegative2240674 - 22408898112.72
bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlmlDJ564_RS10455Not AvailablePositive2241422 - 224369285226.0
ggdef domain-containing proteinDJ564_RS10460Not AvailablePositive2243834 - 224623689458.0
d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidaseDJ564_RS10470Not AvailableNegative2246370 - 224783052406.1
yggl family proteinDJ564_RS10475Not AvailablePositive2248065 - 224840912740.1
benzoate/h(+) symporter bene family transporterDJ564_RS10480Not AvailableNegative2248566 - 224975641180.1

Displaying genes 2031 – 2040 of 6211 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.