Pseudomonas sp. Leaf98

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. Leaf98 is characterized by a single replicon, which indicates a streamlined genomic structure that may contribute to its adaptability in various environments. The genome of Pseudomonas sp. Leaf98 is cataloged under the accession QFZI00000000.1, providing a reference point for further research and analysis. Pseudomonas species are well-known for their metabolic diversity, which allows them to thrive in a wide range of habitats, including soil, water, and plant surfaces. The traits of Pseudomonas sp. Leaf98 may suggest specific adaptations to its ecological niche, potentially influencing its interactions within the microbial community and with host plants. The presence of a single replicon in its genome can facilitate efficient replication and gene expression, which might enhance its survival and competitiveness in natural ecosystems. Understanding the genomic characteristics of Pseudomonas sp. Leaf98, particularly through the lens of its single-replicon structure, can provide insights into its ecological roles, such as nutrient cycling or plant interaction. In summary, Pseudomonas sp. Leaf98, with its single replicon and documented genomic information, may exhibit unique metabolic capabilities that enable it to adapt to and thrive in its specific ecological niche, thereby contributing to the overall dynamics of the microbial community and the health of the surrounding environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. Leaf98
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. Leaf98
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. Leaf98 NODE_107_length_204_cov_51.740157, whole

Gene Summary

Adenine Count

1301543 bp

Thymine Count

1303452 bp

Guanine Count

1972309 bp

Cytosine Count

1965907 bp

Genome Length

6543211 bp

Protein-coding Genes

5855 genes

Non-Coding Genes

148 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
cupin domain-containing proteinDJ480_24210Not AvailablePositive5149946 - 515029013084.8
outer membrane porin, oprd familyDJ480_24215Not AvailablePositive5150396 - 515164646198.0
3-hydroxyisobutyrate dehydrogenaseDJ480_24220Not AvailableNegative5151698 - 515258530174.5
methylmalonate-semialdehyde dehydrogenase (coa acylating)DJ480_24225Not AvailableNegative5152601 - 515411853707.9
lysr family transcriptional regulatorDJ480_24230Not AvailablePositive5154249 - 515519635297.6
duf3077 domain-containing proteinDJ480_24235Not AvailablePositive5155523 - 515581310512.7
hypothetical proteinDJ480_24240Not AvailableNegative5156117 - 515660817316.9
ggdef domain-containing proteinDJ480_24245Not AvailableNegative5156613 - 515787544937.1
duf4154 domain-containing proteinDJ480_24250Not AvailableNegative5157872 - 515843820413.8
exodeoxyribonuclease v subunit alphaDJ480_24255Not AvailableNegative5158581 - 516065075656.9

Displaying genes 4741 – 4750 of 6003 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.