Pseudomonas sp. Leaf98

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. Leaf98 is characterized by a single replicon, which indicates a streamlined genomic structure that may contribute to its adaptability in various environments. The genome of Pseudomonas sp. Leaf98 is cataloged under the accession QFZI00000000.1, providing a reference point for further research and analysis. Pseudomonas species are well-known for their metabolic diversity, which allows them to thrive in a wide range of habitats, including soil, water, and plant surfaces. The traits of Pseudomonas sp. Leaf98 may suggest specific adaptations to its ecological niche, potentially influencing its interactions within the microbial community and with host plants. The presence of a single replicon in its genome can facilitate efficient replication and gene expression, which might enhance its survival and competitiveness in natural ecosystems. Understanding the genomic characteristics of Pseudomonas sp. Leaf98, particularly through the lens of its single-replicon structure, can provide insights into its ecological roles, such as nutrient cycling or plant interaction. In summary, Pseudomonas sp. Leaf98, with its single replicon and documented genomic information, may exhibit unique metabolic capabilities that enable it to adapt to and thrive in its specific ecological niche, thereby contributing to the overall dynamics of the microbial community and the health of the surrounding environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. Leaf98
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. Leaf98
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. Leaf98 NODE_107_length_204_cov_51.740157, whole

Gene Summary

Adenine Count

1301543 bp

Thymine Count

1303452 bp

Guanine Count

1972309 bp

Cytosine Count

1965907 bp

Genome Length

6543211 bp

Protein-coding Genes

5855 genes

Non-Coding Genes

148 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
muconolactone delta-isomeraseDJ480_24155Not AvailableNegative5139423 - 513971311212.5
muconate cycloisomeraseDJ480_24160Not AvailableNegative5139726 - 514085340283.8
lysr family transcriptional regulatorDJ480_24165Not AvailablePositive5140968 - 514184332013.0
arac family transcriptional regulatorDJ480_24170Not AvailableNegative5141977 - 514296937435.7
anthranilate 1,2-dioxygenase large subunitDJ480_24175Not AvailablePositive5143283 - 514467452684.9
anthranilate 1,2-dioxygenase small subunitDJ480_24180Not AvailablePositive5144674 - 514516519318.7
anthranilate 1,2-dioxygenase electron transfer component antcDJ480_24190Not AvailablePositive5145411 - 514641837060.9
amino acid permeaseDJ480_24195Not AvailablePositive5146491 - 514789150669.2
tryptophan 2,3-dioxygenaseDJ480_24200Not AvailableNegative5148067 - 514892432916.4
arylformamidaseDJ480_24205Not AvailableNegative5148921 - 514957123631.2

Displaying genes 4731 – 4740 of 6003 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.