Pseudomonas sp. Leaf98

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas sp. Leaf98 is characterized by a single replicon, which indicates a streamlined genomic structure that may contribute to its adaptability in various environments. The genome of Pseudomonas sp. Leaf98 is cataloged under the accession QFZI00000000.1, providing a reference point for further research and analysis. Pseudomonas species are well-known for their metabolic diversity, which allows them to thrive in a wide range of habitats, including soil, water, and plant surfaces. The traits of Pseudomonas sp. Leaf98 may suggest specific adaptations to its ecological niche, potentially influencing its interactions within the microbial community and with host plants. The presence of a single replicon in its genome can facilitate efficient replication and gene expression, which might enhance its survival and competitiveness in natural ecosystems. Understanding the genomic characteristics of Pseudomonas sp. Leaf98, particularly through the lens of its single-replicon structure, can provide insights into its ecological roles, such as nutrient cycling or plant interaction. In summary, Pseudomonas sp. Leaf98, with its single replicon and documented genomic information, may exhibit unique metabolic capabilities that enable it to adapt to and thrive in its specific ecological niche, thereby contributing to the overall dynamics of the microbial community and the health of the surrounding environment.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas sp. Leaf98
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Image of Pseudomonas sp. Leaf98
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudomonas sp. Leaf98 NODE_107_length_204_cov_51.740157, whole

Gene Summary

Adenine Count

1301543 bp

Thymine Count

1303452 bp

Guanine Count

1972309 bp

Cytosine Count

1965907 bp

Genome Length

6543211 bp

Protein-coding Genes

5855 genes

Non-Coding Genes

148 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinDJ480_08545Not AvailableNegative1832572 - 183340830966.4
1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampdDJ480_08550Not AvailableNegative1833405 - 183396820809.5
duf1631 domain-containing proteinDJ480_08555Not AvailableNegative1834030 - 183618680474.1
carboxylating nicotinate-nucleotide diphosphorylaseDJ480_08560Not AvailablePositive1836430 - 183727830282.7
dephospho-coa kinaseDJ480_08565Not AvailableNegative1837333 - 183763811586.5
Trna-thrNot AvailableNot AvailablePositive1837802 - 1837877Not Available
prepilin-type cleavage/methylation domain-containing proteinDJ480_08575Not AvailableNegative1837942 - 183835513847.9
type ii secretion system f family proteinDJ480_08580Not AvailablePositive1838558 - 183976643439.6
prepilin peptidaseDJ480_08585Not AvailablePositive1839763 - 184062931749.9
dephospho-coa kinaseDJ480_08590Not AvailablePositive1840626 - 184124923037.7

Displaying genes 1771 – 1780 of 6003 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.