endosymbiont of Escarpia spicata

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Family

Genus

Description

Escarpia spicata, a marine polychaete worm, is associated with a notable endosymbiont characterized by its unique genetic structure. This endosymbiont possesses a single replicon, indicating a streamlined genomic organization that may contribute to its adaptive capabilities within the host environment. The genomic data for this endosymbiont is cataloged under the accession number QFXE00000000.1, which provides a reference for researchers studying its genetic makeup and potential functions. Though specific characteristics of the endosymbiont's metabolism or ecological roles are not detailed, the presence of a single replicon suggests a possible specialization in its relationship with Escarpia spicata. The endosymbiotic relationship likely plays a significant role in the survival or ecological success of Escarpia spicata. Such partnerships often enhance nutrient acquisition or offer protection against environmental stressors, thus contributing to the overall fitness of the host organism. Understanding the dynamics of this endosymbiotic relationship could provide insights into the evolutionary adaptations of marine invertebrates and their interactions with microbial communities. As research advances, the implications of the findings related to this endosymbiont may yield valuable information about the complexities of marine ecosystems and the evolutionary strategies employed by host organisms.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: endosymbiont of Escarpia spicata isolate A1462

Gene Summary

Adenine Count

933011 bp

Thymine Count

928250 bp

Guanine Count

1089883 bp

Cytosine Count

1111207 bp

Genome Length

4062513 bp

Protein-coding Genes

3482 genes

Non-Coding Genes

72 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
haloacid dehalogenaseDIZ78_11940Not AvailableNegative2666146 - 266700331718.8
had family hydrolaseDIZ78_11945Not AvailableNegative2667000 - 266918080875.1
30s ribosomal protein s16DIZ78_11950Not AvailablePositive2669382 - 26696339423.24
ribosome maturation factor rimmDIZ78_11955Not AvailablePositive2669677 - 267018019017.6
trna (guanosine(37)-n1)-methyltransferase trmdDIZ78_11960Not AvailablePositive2670191 - 267095228018.4
50s ribosomal protein l19DIZ78_11965Not AvailablePositive2670956 - 267130012856.6
hypothetical proteinDIZ78_11970Not AvailableNegative2671297 - 26714796984.36
exodeoxyribonuclease iDIZ78_11975Not AvailablePositive2671473 - 267290654820.2
hypothetical proteinDIZ78_11980Not AvailableNegative2673044 - 267333111009.9
ankyrin repeat domain-containing proteinDIZ78_11985Not AvailableNegative2673430 - 267407722503.1

Displaying genes 2331 – 2340 of 3554 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.