endosymbiont of Lamellibrachia luymesi

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Family

Genus

Description

Lamellibrachia luymesi, a species of deep-sea tube worm, is associated with a notable endosymbiont that plays a crucial role in its ecology. This endosymbiont possesses a single replicon, indicating a streamlined genomic structure that is likely adapted to the specific environmental conditions encountered by L. luymesi in the deep-sea hydrothermal vent ecosystems. The genetic information of this endosymbiont can be accessed through the sequence accession QFXD00000000.1, which provides a reference point for studying its genomic characteristics and functions. Understanding the genomic makeup of this endosymbiont is essential for elucidating its metabolic capabilities, particularly its potential for chemosynthesis, which is critical in the nutrient-poor environments of hydrothermal vents. The relationship between L. luymesi and its endosymbiont is symbiotic, where the endosymbiont likely provides essential nutrients, such as organic carbon, through chemosynthetic processes, while the host offers a protected environment and access to inorganic substrates. This interaction exemplifies how organisms in extreme environments can rely on mutualistic relationships for survival. In summary, the single replicon of the endosymbiont of Lamellibrachia luymesi, as documented under accession QFXD00000000.1, highlights its specialized adaptation to the deep-sea habitat, contributing to the overall success and resilience of the host species in a challenging ecological niche.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: endosymbiont of Lamellibrachia luymesi isolate A1422

Gene Summary

Adenine Count

810517 bp

Thymine Count

798641 bp

Guanine Count

951728 bp

Cytosine Count

965095 bp

Genome Length

3525981 bp

Protein-coding Genes

3541 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
is66 family transposaseDIZ79_18525Not AvailableNegative3454892 - 345518510845.9
hypothetical proteinDIZ79_18530Not AvailableNegative3455186 - 345547010540.3
hypothetical proteinDIZ79_18535Not AvailablePositive3455516 - 345689252324.0
hypothetical proteinDIZ79_18540Not AvailableNegative3457062 - 345866960246.0
hypothetical proteinDIZ79_18545Not AvailableNegative3458666 - 345941228320.9
yicc family proteinDIZ79_18550Not AvailableNegative3459576 - 346044233740.1
serine/threonine-protein phosphataseDIZ79_18560Not AvailablePositive3461558 - 346245733673.5
ribonuclease phDIZ79_18565Not AvailablePositive3462467 - 346318325707.7
non-canonical purine ntp pyrophosphatase, rdgb/ham1 familyDIZ79_18570Not AvailablePositive3463304 - 346391221798.7
hypothetical proteinDIZ79_18575Not AvailablePositive3463939 - 346432814295.8

Displaying genes 3521 – 3530 of 3601 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.