endosymbiont of Lamellibrachia luymesi

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Family

Genus

Description

Lamellibrachia luymesi, a species of deep-sea tube worm, is associated with a notable endosymbiont that plays a crucial role in its ecology. This endosymbiont possesses a single replicon, indicating a streamlined genomic structure that is likely adapted to the specific environmental conditions encountered by L. luymesi in the deep-sea hydrothermal vent ecosystems. The genetic information of this endosymbiont can be accessed through the sequence accession QFXD00000000.1, which provides a reference point for studying its genomic characteristics and functions. Understanding the genomic makeup of this endosymbiont is essential for elucidating its metabolic capabilities, particularly its potential for chemosynthesis, which is critical in the nutrient-poor environments of hydrothermal vents. The relationship between L. luymesi and its endosymbiont is symbiotic, where the endosymbiont likely provides essential nutrients, such as organic carbon, through chemosynthetic processes, while the host offers a protected environment and access to inorganic substrates. This interaction exemplifies how organisms in extreme environments can rely on mutualistic relationships for survival. In summary, the single replicon of the endosymbiont of Lamellibrachia luymesi, as documented under accession QFXD00000000.1, highlights its specialized adaptation to the deep-sea habitat, contributing to the overall success and resilience of the host species in a challenging ecological niche.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: endosymbiont of Lamellibrachia luymesi isolate A1422

Gene Summary

Adenine Count

810517 bp

Thymine Count

798641 bp

Guanine Count

951728 bp

Cytosine Count

965095 bp

Genome Length

3525981 bp

Protein-coding Genes

3541 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
is630 family transposaseDIZ79_13230Not AvailablePositive2424691 - 242502312342.0
transposaseDIZ79_13235Not AvailableNegative2425024 - 24251856108.57
pyruvate, phosphate dikinaseDIZ79_13240Not AvailablePositive2425641 - 2428427102514.0
hypothetical proteinDIZ79_13245Not AvailablePositive2428604 - 242894512679.5
hypothetical proteinDIZ79_13250Not AvailablePositive2428960 - 243039053336.3
sec-dependent nitrous-oxide reductaseDIZ79_13255Not AvailablePositive2430546 - 243285885338.6
is3 family transposaseDIZ79_13260Not AvailableNegative2433066 - 243342714181.8
hypothetical proteinDIZ79_13270Not AvailableNegative2435602 - 24358057885.6
hypothetical proteinDIZ79_13275Not AvailableNegative2435772 - 243620916443.8
hypothetical proteinDIZ79_13280Not AvailablePositive2436427 - 243698721551.7

Displaying genes 2521 – 2530 of 3601 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.