endosymbiont of Lamellibrachia luymesi

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Family

Genus

Description

Lamellibrachia luymesi, a species of deep-sea tube worm, is associated with a notable endosymbiont that plays a crucial role in its ecology. This endosymbiont possesses a single replicon, indicating a streamlined genomic structure that is likely adapted to the specific environmental conditions encountered by L. luymesi in the deep-sea hydrothermal vent ecosystems. The genetic information of this endosymbiont can be accessed through the sequence accession QFXD00000000.1, which provides a reference point for studying its genomic characteristics and functions. Understanding the genomic makeup of this endosymbiont is essential for elucidating its metabolic capabilities, particularly its potential for chemosynthesis, which is critical in the nutrient-poor environments of hydrothermal vents. The relationship between L. luymesi and its endosymbiont is symbiotic, where the endosymbiont likely provides essential nutrients, such as organic carbon, through chemosynthetic processes, while the host offers a protected environment and access to inorganic substrates. This interaction exemplifies how organisms in extreme environments can rely on mutualistic relationships for survival. In summary, the single replicon of the endosymbiont of Lamellibrachia luymesi, as documented under accession QFXD00000000.1, highlights its specialized adaptation to the deep-sea habitat, contributing to the overall success and resilience of the host species in a challenging ecological niche.

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

MAG: endosymbiont of Lamellibrachia luymesi isolate A1422

Gene Summary

Adenine Count

810517 bp

Thymine Count

798641 bp

Guanine Count

951728 bp

Cytosine Count

965095 bp

Genome Length

3525981 bp

Protein-coding Genes

3541 genes

Non-Coding Genes

60 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycerol-3-phosphate dehydrogenaseDIZ79_09825Not AvailablePositive1824641 - 182570538173.8
trna (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-o)- methyltransferase trmlDIZ79_09830Not AvailableNegative1825839 - 182630317327.7
dihydroorotate dehydrogenaseDIZ79_09835Not AvailablePositive1826347 - 182731534346.1
cyclic nucleotide-binding proteinDIZ79_09840Not AvailablePositive1827338 - 182860646637.1
hypothetical proteinDIZ79_09845Not AvailableNegative1828677 - 182948328780.3
asparagine synthetaseDIZ79_09850Not AvailableNegative1829678 - 183007915188.3
conjugal transfer protein trabDIZ79_09855Not AvailablePositive1830287 - 183148343988.7
multifunctional cca addition/repair proteinDIZ79_09860Not AvailableNegative1831623 - 183283445086.6
pilz domain-containing proteinDIZ79_09870Not AvailablePositive1833601 - 183392411823.2
fad-linked oxidaseDIZ79_09875Not AvailablePositive1834324 - 1838172142736.0

Displaying genes 1871 – 1880 of 3601 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.