Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis echigonensis |
| Strain | dsm 45165 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1417701 bp
Thymine Count
1420489 bp
Guanine Count
3248395 bp
Cytosine Count
3226378 bp
Genome Length
9312963 bp
Protein-coding Genes
8661 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5s ribosomal rna | Not Available | Not Available | Positive | 52869 - 52985 | Not Available |
| lipoprotein-anchoring transpeptidase erfk/srfk | ATK30_0044 | Not Available | Negative | 53068 - 54273 | 42343.4 |
| dolichyl-phosphate-mannose-protein mannosyltransferase | ATK30_0045 | Not Available | Positive | 54474 - 55976 | 53128.4 |
| alkylation response protein aidb-like acyl-coa dehydrogenase | ATK30_0046 | Not Available | Negative | 56260 - 58485 | 78324.7 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | ATK30_0047 | Not Available | Negative | 58497 - 59366 | 29267.4 |
| acyl dehydratase | ATK30_0048 | Not Available | Negative | 59389 - 60249 | 30755.1 |
| polyketide cyclase/dehydrase/lipid transport protein | ATK30_0049 | Not Available | Negative | 60264 - 60698 | 15048.9 |
| acetyl-coa acetyltransferase | ATK30_0050 | Not Available | Negative | 60742 - 61953 | 42662.2 |
| tetr family transcriptional regulator | ATK30_0051 | Not Available | Positive | 62084 - 62773 | 24457.8 |
| bnr/asp-box repeat protein | ATK30_0052 | Not Available | Positive | 63176 - 64762 | 54396.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
