Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis echigonensis |
| Strain | dsm 45165 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1417701 bp
Thymine Count
1420489 bp
Guanine Count
3248395 bp
Cytosine Count
3226378 bp
Genome Length
9312963 bp
Protein-coding Genes
8661 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa reductase-like nad-dependent aldehyde dehydrogenase | ATK30_0036 | Not Available | Positive | 38492 - 39889 | 48905.1 |
| putative oxidoreductase | ATK30_0037 | Not Available | Negative | 39986 - 40429 | 14765.0 |
| zip family zinc transporter | ATK30_0038 | Not Available | Positive | 40762 - 41583 | 27305.7 |
| hypothetical protein | ATK30_0039 | Not Available | Negative | 41672 - 43303 | 58406.3 |
| non-ribosomal peptide synthetase-like protein | ATK30_0040 | Not Available | Positive | 43914 - 47927 | 142296.0 |
| 16s ribosomal rna | Not Available | Not Available | Positive | 47859 - 49382 | Not Available |
| phospholipase c | ATK30_0041 | Not Available | Positive | 48165 - 49757 | 57081.0 |
| 23s ribosomal rna | Not Available | Not Available | Positive | 49683 - 52800 | Not Available |
| phospholipase c | ATK30_0042 | Not Available | Positive | 49807 - 51840 | 73244.5 |
| vit1/ccc1 family predicted fe2+/mn2+ transporter | ATK30_0043 | Not Available | Negative | 51996 - 52733 | 25202.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
