Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis echigonensis |
| Strain | dsm 45165 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1417701 bp
Thymine Count
1420489 bp
Guanine Count
3248395 bp
Cytosine Count
3226378 bp
Genome Length
9312963 bp
Protein-coding Genes
8661 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hxlr family transcriptional regulator | ATK30_0026 | Not Available | Positive | 28778 - 29179 | 14708.9 |
| myo-inositol catabolism protein iolh | ATK30_0027 | Not Available | Negative | 29332 - 30198 | 31888.6 |
| sugar phosphate isomerase/epimerase | ATK30_0028 | Not Available | Negative | 30265 - 31257 | 35565.2 |
| myo-inositol 2-dehydrogenase | ATK30_0029 | Not Available | Negative | 31254 - 32273 | 36579.5 |
| universal stress protein family protein | ATK30_0030 | Not Available | Negative | 32293 - 32637 | 12051.9 |
| major inositol transporter-like sp family mfs transporter | ATK30_0031 | Not Available | Negative | 32640 - 34088 | 51586.1 |
| 2-keto-myo-inositol dehydratase | ATK30_0032 | Not Available | Negative | 34166 - 35104 | 34098.2 |
| laci family transcriptional regulator | ATK30_0033 | Not Available | Positive | 35261 - 36292 | 36831.8 |
| hypothetical protein | ATK30_0034 | Not Available | Negative | 36391 - 36852 | 17269.7 |
| choline dehydrogenase | ATK30_0035 | Not Available | Positive | 36948 - 38483 | 53947.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
