Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis echigonensis |
| Strain | dsm 45165 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-positive |
| Shape | Not Available |
| Mobility | non-motile |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1417701 bp
Thymine Count
1420489 bp
Guanine Count
3248395 bp
Cytosine Count
3226378 bp
Genome Length
9312963 bp
Protein-coding Genes
8661 genes
Non-Coding Genes
101 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa synthetase (amp-forming)/amp-acid ligase ii | ATK30_0016 | Not Available | Positive | 16375 - 18720 | 84144.0 |
| s-(hydroxymethyl)glutathione dehydrogenase/alcohol dehydrogenase | ATK30_0017 | Not Available | Positive | 18745 - 19842 | 38304.1 |
| acyl-coa reductase-like nad-dependent aldehyde dehydrogenase | ATK30_0018 | Not Available | Positive | 19864 - 21327 | 50718.9 |
| gntr family transcriptional regulator | ATK30_0019 | Not Available | Negative | 21350 - 22108 | 27515.7 |
| 5-dehydro-2-deoxygluconokinase | ATK30_0020 | Not Available | Positive | 22229 - 23176 | 33715.9 |
| hypothetical protein | ATK30_0021 | Not Available | Positive | 23173 - 24054 | 30910.3 |
| 5-deoxyglucuronate isomerase | ATK30_0022 | Not Available | Positive | 24051 - 24890 | 30205.2 |
| 3d-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase | ATK30_0023 | Not Available | Positive | 24887 - 26752 | 66744.1 |
| malonate-semialdehyde dehydrogenase (acetylating)/methylmalonate-semialdehyde dehydrogenase | ATK30_0024 | Not Available | Positive | 26764 - 28257 | 52360.9 |
| doxx-like protein | ATK30_0025 | Not Available | Negative | 28304 - 28672 | 12717.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
