Amycolatopsis echigonensis str. dsm 45165

aerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis echigonensis strain DSM 45165 is a Gram-positive, aerobic bacterium that exhibits non-motility. This strain is characterized by the presence of flagella, which typically indicates potential for movement in certain contexts; however, as it is classified as non-motile, this might suggest that flagella are not utilized for locomotion in its natural habitat. The optimal growth temperature for A. echigonensis is 29°C, placing it within the mesophilic temperature range. This suggests that the bacterium thrives in moderate temperature environments, which is common for many soil-dwelling actinobacteria. The organism has a single replicon, indicating a simpler genomic structure that may facilitate efficient replication under optimal conditions. The accession number PJMY00000000.1 can be referenced for genetic and genomic information specific to this strain. The traits of A. echigonensis suggest that it may play a role in specific ecological niches where aerobic conditions and moderate temperatures prevail, potentially influencing soil health and nutrient cycling. Understanding the characteristics of A. echigonensis can contribute to insights into its ecological role, particularly how its mesophilic nature and aerobic metabolism may affect microbial community dynamics and interactions in its environment.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis echigonensis
Straindsm 45165

Profile

Physiology
Gram staining propertiesGram-positive
ShapeNot Available
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis echigonensis strain DSM 45165 Ga0074778_13, whole

Gene Summary

Adenine Count

1417701 bp

Thymine Count

1420489 bp

Guanine Count

3248395 bp

Cytosine Count

3226378 bp

Genome Length

9312963 bp

Protein-coding Genes

8661 genes

Non-Coding Genes

101 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinATK30_6839Not AvailablePositive7001816 - 700209410404.1
hypothetical proteinATK30_6840Not AvailablePositive7002187 - 700272920078.6
homeodomain-like domain-containing proteinATK30_6841Not AvailablePositive7002883 - 700340119102.8
Hypothetical proteinATK30_6842Not AvailablePositive7003394 - 700368710289.9
hypothetical proteinATK30_6843Not AvailablePositive7003698 - 70039679346.81
Phi92_gp164ATK30_6844Not AvailablePositive7003991 - 700497436223.6
uncharacterized protein duf1003ATK30_6845Not AvailablePositive7004971 - 700542316733.1
galactosyltransferase-like proteinATK30_6846Not AvailablePositive7005423 - 700605523982.1
TerminaseATK30_6847Not AvailablePositive7006126 - 700765856815.7
Portal proteinATK30_6848Not AvailablePositive7007673 - 700924156870.3

Displaying genes 11 – 20 of 8762 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.