Burkholderia sp. 28_3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia sp. 28_3 is characterized by having a single replicon, which is significant in understanding its genomic structure and potential functional capabilities. The genome of this strain is represented by the accession QKZF00000000.1, indicating that it has been sequenced and is available for further study. Burkholderia species are known for their diverse ecological roles and can be found in various environments, often associated with soil and plant systems. Their adaptability and metabolic versatility make them important players in biogeochemical cycles. The single replicon characteristic of Burkholderia sp. 28_3 may suggest streamlined genomic organization, which can influence its growth rate and adaptability to different environmental conditions. This trait can also impact its ability to exchange genetic material, an important factor in the evolution of traits such as antibiotic resistance or pathogenicity in other Burkholderia species. Overall, understanding the genomic features of Burkholderia sp. 28_3 can provide insights into its ecological niche and potential applications in biotechnology or agriculture, where certain Burkholderia strains are utilized for biocontrol or as plant growth-promoting rhizobacteria. The implications of its single replicon structure could be key to understanding its capabilities in these contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia sp. 28_3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia sp. 28_3 Ga0255729_186, whole genome shotgun

Gene Summary

Adenine Count

1374828 bp

Thymine Count

1386125 bp

Guanine Count

2803826 bp

Cytosine Count

2762320 bp

Genome Length

8327191 bp

Protein-coding Genes

7455 genes

Non-Coding Genes

227 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
formate dehydrogenase alpha subunitDFS13_102492Not AvailableNegative1539365 - 1542316107175.0
formate dehydrogenase beta subunitDFS13_102493Not AvailableNegative1542334 - 154391155022.9
formate dehydrogenase gamma subunitDFS13_102494Not AvailableNegative1543908 - 154440817410.8
lysr family transcriptional regulator of molybdate metabolismDFS13_102495Not AvailablePositive1544540 - 154564639512.1
hypothetical proteinDFS13_102496Not AvailablePositive1545747 - 15460169345.29
uncharacterized protein duf4148DFS13_102497Not AvailablePositive1546362 - 154671511991.1
Tmrna,resume consensus sequence (at 83): cgtaactgcaaacgacgaNot AvailableNot AvailablePositive1546964 - 1547333Not Available
phosphoglycolate phosphataseDFS13_102499Not AvailableNegative1547351 - 154806424996.9
3-demethylubiquinone-9 3-methyltransferaseDFS13_102500Not AvailableNegative1548078 - 154877625154.1
oop family ompa-ompf porinDFS13_102501Not AvailableNegative1548929 - 154959723968.6

Displaying genes 1611 – 1620 of 7682 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.