Burkholderia sp. 28_3

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia sp. 28_3 is characterized by having a single replicon, which is significant in understanding its genomic structure and potential functional capabilities. The genome of this strain is represented by the accession QKZF00000000.1, indicating that it has been sequenced and is available for further study. Burkholderia species are known for their diverse ecological roles and can be found in various environments, often associated with soil and plant systems. Their adaptability and metabolic versatility make them important players in biogeochemical cycles. The single replicon characteristic of Burkholderia sp. 28_3 may suggest streamlined genomic organization, which can influence its growth rate and adaptability to different environmental conditions. This trait can also impact its ability to exchange genetic material, an important factor in the evolution of traits such as antibiotic resistance or pathogenicity in other Burkholderia species. Overall, understanding the genomic features of Burkholderia sp. 28_3 can provide insights into its ecological niche and potential applications in biotechnology or agriculture, where certain Burkholderia strains are utilized for biocontrol or as plant growth-promoting rhizobacteria. The implications of its single replicon structure could be key to understanding its capabilities in these contexts.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia sp. 28_3
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia sp. 28_3 Ga0255729_186, whole genome shotgun

Gene Summary

Adenine Count

1374828 bp

Thymine Count

1386125 bp

Guanine Count

2803826 bp

Cytosine Count

2762320 bp

Genome Length

8327191 bp

Protein-coding Genes

7455 genes

Non-Coding Genes

227 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative transcriptional regulator yheoDFS13_102312Not AvailableNegative1358328 - 135897524432.2
ornithine cyclodeaminaseDFS13_102313Not AvailableNegative1359117 - 136009133775.8
amino acid abc transporter substrate-binding protein (paat family)DFS13_102314Not AvailablePositive1360473 - 136124927580.1
glycine/d-amino acid oxidase-like deaminating enzymeDFS13_102315Not AvailablePositive1361317 - 136256145355.4
hypothetical proteinDFS13_102316Not AvailablePositive1363073 - 136614789500.2
putative lipoprotein with yx(fwy)xxd motifDFS13_102317Not AvailablePositive1366471 - 136683012717.2
rna polymerase rpoe-like sigma-24 subunitDFS13_102318Not AvailablePositive1366858 - 136737319096.2
anti-sigma factor rsiwDFS13_102319Not AvailablePositive1367370 - 136815228149.4
hypothetical proteinDFS13_102320Not AvailablePositive1368179 - 136860115048.3
outer membrane lipoprotein-sorting proteinDFS13_102321Not AvailablePositive1368598 - 136923022747.9

Displaying genes 1431 – 1440 of 7682 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.