Rhodobacter sp. 140A

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Rhodobacter

Description

Rhodobacter sp. 140A is characterized as a rod-shaped bacterium featuring the presence of flagella, which likely aids in its motility. The organism possesses a single replicon, suggesting a streamlined genomic structure that may facilitate efficient replication and cellular processes. The accession number for Rhodobacter sp. 140A is QNSD00000000.1, which serves as a unique identifier for its genomic data in biological databases. This designation allows researchers to access specific genetic information pertinent to this strain. In the context of its ecological significance, the traits of Rhodobacter sp. 140A position it within a group of bacteria known for their role in various biogeochemical cycles, particularly in aquatic environments. The presence of flagella may enhance its ability to navigate and thrive in diverse habitats, contributing to nutrient cycling and organic matter degradation. As a member of the Rhodobacter genus, this strain is likely involved in processes such as photosynthesis and nitrogen fixation, which are crucial for ecosystem functioning. Overall, the distinct morphological and genetic characteristics of Rhodobacter sp. 140A underscore its potential contributions to ecological dynamics, particularly in nutrient-rich environments where its motility and metabolic capabilities can be advantageous.

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacter sp. 140A Ga0227275_182, whole genome shotgun sequence.

Gene Summary

Adenine Count

674560 bp

Thymine Count

672724 bp

Guanine Count

1427839 bp

Cytosine Count

1426765 bp

Genome Length

4202110 bp

Protein-coding Genes

3963 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-isopropylmalate dehydrogenaseDFO80_101119Not AvailablePositive114550 - 11565639816.9
udpglucose 6-dehydrogenaseDFO80_101120Not AvailableNegative115720 - 11689542912.6
ca2+-binding rtx toxin-like proteinDFO80_101121Not AvailableNegative117164 - 120154101412.0
ribonuclease dDFO80_101122Not AvailablePositive120400 - 12101422654.3
arabinose-5-phosphate isomeraseDFO80_101123Not AvailablePositive120995 - 12195133556.8
lipopolysaccharide export system protein lptcDFO80_101124Not AvailablePositive121951 - 12255020500.3
lipopolysaccharide export system protein lptaDFO80_101125Not AvailablePositive122561 - 12305216990.7
lipopolysaccharide export system atp-binding proteinDFO80_101126Not AvailablePositive123049 - 12382528477.6
ssu ribosomal protein s30p /sigma 54 modulation proteinDFO80_101127Not AvailablePositive124057 - 12463221482.3
phosphotransferase iia-like nitrogen-regulatory protein ptsnDFO80_101128Not AvailablePositive124644 - 12513217195.9

Displaying genes 261 – 270 of 4107 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.