Rhodobacter sp. 140A

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Genus

Rhodobacter

Description

Rhodobacter sp. 140A is characterized as a rod-shaped bacterium featuring the presence of flagella, which likely aids in its motility. The organism possesses a single replicon, suggesting a streamlined genomic structure that may facilitate efficient replication and cellular processes. The accession number for Rhodobacter sp. 140A is QNSD00000000.1, which serves as a unique identifier for its genomic data in biological databases. This designation allows researchers to access specific genetic information pertinent to this strain. In the context of its ecological significance, the traits of Rhodobacter sp. 140A position it within a group of bacteria known for their role in various biogeochemical cycles, particularly in aquatic environments. The presence of flagella may enhance its ability to navigate and thrive in diverse habitats, contributing to nutrient cycling and organic matter degradation. As a member of the Rhodobacter genus, this strain is likely involved in processes such as photosynthesis and nitrogen fixation, which are crucial for ecosystem functioning. Overall, the distinct morphological and genetic characteristics of Rhodobacter sp. 140A underscore its potential contributions to ecological dynamics, particularly in nutrient-rich environments where its motility and metabolic capabilities can be advantageous.

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodobacter sp. 140A Ga0227275_182, whole genome shotgun sequence.

Gene Summary

Adenine Count

674560 bp

Thymine Count

672724 bp

Guanine Count

1427839 bp

Cytosine Count

1426765 bp

Genome Length

4202110 bp

Protein-coding Genes

3963 genes

Non-Coding Genes

144 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tripartite atp-independent transporter dctm subunitDFO80_112107Not AvailablePositive2315953 - 231725444760.7
trap-type c4-dicarboxylate transport system substrate-binding proteinDFO80_112108Not AvailablePositive2317283 - 231828135065.0
2,3-dihydroxybiphenyl 1,2-dioxygenaseDFO80_112109Not AvailablePositive2318388 - 231937436733.6
3-(3-hydroxy-phenyl)propionate hydroxylaseDFO80_112110Not AvailablePositive2319374 - 232086754662.6
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase in catechol pathwayDFO80_112111Not AvailablePositive2320871 - 232171329857.5
iclr family transcriptional regulatorDFO80_112112Not AvailablePositive2321752 - 232254028062.1
carboxymuconolactone decarboxylase family proteinDFO80_112113Not AvailableNegative2322537 - 232308219346.4
enoyl-coa hydrataseDFO80_112114Not AvailableNegative2323174 - 232395027048.7
d-arabinose 1-dehydrogenase-like zn-dependent alcohol dehydrogenaseDFO80_112115Not AvailableNegative2323958 - 232498035568.3
acyl-coa dehydrogenaseDFO80_112116Not AvailablePositive2325144 - 232631041533.0

Displaying genes 2321 – 2330 of 4107 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.