Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| grx4 family monothiol glutaredoxin | DEH80_04580 | Not Available | Positive | 994339 - 994662 | 12011.4 |
| rna-binding protein | DEH80_04585 | Not Available | Positive | 994694 - 995131 | 16631.0 |
| isocitrate dehydrogenase (nadp(+)) | DEH80_04590 | Not Available | Positive | 995274 - 997037 | 65071.6 |
| mechanosensitive ion channel protein mscs | DEH80_04595 | Not Available | Positive | 997303 - 998364 | 38923.6 |
| hypothetical protein | DEH80_04600 | Not Available | Negative | 998374 - 1000227 | 64383.5 |
| competence/damage-inducible protein a | DEH80_04605 | Not Available | Positive | 1000355 - 1001113 | 27241.7 |
| hypothetical protein | DEH80_04610 | Not Available | Positive | 1001369 - 1001770 | 14711.2 |
| cusa/czca family heavy metal efflux rnd transporter | DEH80_04615 | Not Available | Positive | 1001767 - 1004871 | 111843.0 |
| hypothetical protein | DEH80_04620 | Not Available | Positive | 1004904 - 1005614 | 25964.4 |
| alcohol dehydrogenase | DEH80_04625 | Not Available | Negative | 1005634 - 1006896 | 45475.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
