Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DEH80_04530 | Not Available | Negative | 983868 - 984695 | 31410.7 |
| glycerophosphodiester phosphodiesterase | DEH80_04535 | Not Available | Negative | 984759 - 985556 | 29762.8 |
| cystathionine beta-lyase | DEH80_04540 | Not Available | Positive | 985624 - 986796 | 41860.0 |
| sodium:alanine symporter | DEH80_04545 | Not Available | Negative | 986822 - 988249 | 50812.4 |
| carboxylating nicotinate-nucleotide diphosphorylase | DEH80_04550 | Not Available | Negative | 988346 - 989248 | 32396.5 |
| ergothioneine biosynthesis protein egtb | DEH80_04555 | Not Available | Negative | 989317 - 990507 | 45493.4 |
| class ii glutamine amidotransferase | DEH80_04560 | Not Available | Negative | 990623 - 991414 | 29084.4 |
| l-histidine n(alpha)-methyltransferase | DEH80_04565 | Not Available | Positive | 991474 - 992460 | 36503.5 |
| ornithine carbamoyltransferase | DEH80_04570 | Not Available | Negative | 992477 - 993376 | 32554.7 |
| superoxide dismutase | DEH80_04575 | Not Available | Negative | 993445 - 994026 | 21605.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
