Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair protein rada | DEH80_04380 | Not Available | Positive | 947985 - 949349 | 48357.2 |
| hypothetical protein | DEH80_04385 | Not Available | Positive | 949463 - 952051 | 93040.9 |
| magnesium/cobalt efflux protein | DEH80_04390 | Not Available | Negative | 952068 - 953339 | 46606.1 |
| hypothetical protein | DEH80_04395 | Not Available | Negative | 953595 - 954401 | 28735.0 |
| 3',5'-cyclic-nucleotide phosphodiesterase | DEH80_04400 | Not Available | Positive | 954513 - 955277 | 27554.8 |
| signal recognition particle protein | DEH80_04405 | Not Available | Positive | 955400 - 956761 | 49262.1 |
| 30s ribosomal protein s16 | DEH80_04410 | Not Available | Positive | 956893 - 957207 | 11384.5 |
| 16s rrna processing protein rimm | DEH80_04415 | Not Available | Positive | 957232 - 957714 | 17906.3 |
| trna (guanosine(37)-n1)-methyltransferase trmd | DEH80_04420 | Not Available | Positive | 957714 - 958460 | 26791.2 |
| 50s ribosomal protein l19 | DEH80_04425 | Not Available | Positive | 958473 - 958829 | 13458.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
