Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar motor protein motb | DEH80_04330 | Not Available | Positive | 938236 - 938928 | 23882.1 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | DEH80_04335 | Not Available | Positive | 938985 - 939749 | 27034.5 |
| 30s ribosomal protein s6 | DEH80_04340 | Not Available | Positive | 939876 - 940286 | 15299.8 |
| 30s ribosomal protein s18 | DEH80_04345 | Not Available | Positive | 940298 - 940525 | 8730.66 |
| 50s ribosomal protein l9 | DEH80_04350 | Not Available | Positive | 940537 - 940986 | 15887.1 |
| replicative dna helicase | DEH80_04355 | Not Available | Positive | 941088 - 942467 | 51140.9 |
| alanine racemase | DEH80_04360 | Not Available | Positive | 942485 - 943573 | 38871.7 |
| hypothetical protein | DEH80_04365 | Not Available | Negative | 943570 - 944259 | 23985.5 |
| stp1/irep family pp2c-type ser/thr phosphatase | DEH80_04370 | Not Available | Negative | 944341 - 945162 | 29954.5 |
| serine/threonine protein kinase | DEH80_04375 | Not Available | Negative | 945162 - 947753 | 93549.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
