Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pantoate--beta-alanine ligase | DEH80_04230 | Not Available | Positive | 917134 - 917994 | 31237.6 |
| aspartate 1-decarboxylase | DEH80_04235 | Not Available | Positive | 918155 - 918535 | 13927.6 |
| glucose-6-phosphate isomerase | DEH80_04240 | Not Available | Positive | 918585 - 920231 | 58568.7 |
| hypothetical protein | DEH80_04245 | Not Available | Positive | 920289 - 920669 | 13614.6 |
| hypothetical protein | DEH80_04250 | Not Available | Positive | 920558 - 921589 | 37596.9 |
| trna epoxyqueuosine(34) reductase queg | DEH80_04255 | Not Available | Negative | 921735 - 922826 | 40679.4 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | DEH80_04260 | Not Available | Positive | 922839 - 924335 | 50482.9 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | DEH80_04265 | Not Available | Positive | 924332 - 924817 | 17625.8 |
| n-acetylmuramoyl-l-alanine amidase | DEH80_04270 | Not Available | Positive | 924917 - 926257 | 48309.6 |
| dna mismatch repair endonuclease mutl | DEH80_04275 | Not Available | Positive | 926324 - 928177 | 67126.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
