Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine biosynthesis protein metw | DEH80_04025 | Not Available | Negative | 880465 - 881058 | 22085.0 |
| homoserine o-acetyltransferase | DEH80_04030 | Not Available | Negative | 881061 - 882185 | 41636.1 |
| yggt family protein | DEH80_04035 | Not Available | Negative | 882185 - 882739 | 20477.9 |
| pyrroline-5-carboxylate reductase | DEH80_04040 | Not Available | Negative | 882739 - 883590 | 29095.9 |
| threonine ammonia-lyase, biosynthetic | DEH80_04045 | Not Available | Positive | 883651 - 885204 | 56232.1 |
| eve domain-containing protein | DEH80_04050 | Not Available | Negative | 885227 - 885703 | 18393.6 |
| 5-formyltetrahydrofolate cyclo-ligase | DEH80_04055 | Not Available | Negative | 885911 - 886516 | 22925.9 |
| cell division protein zapa | DEH80_04065 | Not Available | Negative | 886759 - 887070 | 11810.1 |
| hypothetical protein | DEH80_04070 | Not Available | Negative | 887097 - 887288 | 7185.49 |
| serine endoprotease degq | DEH80_04075 | Not Available | Negative | 887335 - 888732 | 49658.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
