Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DEH80_03925 | Not Available | Positive | 857210 - 859096 | 66921.3 |
| duf3488 domain-containing protein | DEH80_03930 | Not Available | Negative | 859027 - 861042 | 74423.5 |
| duf58 domain-containing protein | DEH80_03935 | Not Available | Negative | 860982 - 861968 | 36073.2 |
| aaa family atpase | DEH80_03940 | Not Available | Negative | 861991 - 862923 | 33544.7 |
| duf3336 domain-containing protein | DEH80_03945 | Not Available | Positive | 863108 - 864580 | 54680.1 |
| hypothetical protein | DEH80_03950 | Not Available | Negative | 864577 - 864999 | 15088.0 |
| valine--trna ligase | DEH80_03955 | Not Available | Negative | 865043 - 867823 | 104844.0 |
| dna polymerase iii subunit chi | DEH80_03960 | Not Available | Negative | 867816 - 868241 | 16206.3 |
| leucyl aminopeptidase | DEH80_03965 | Not Available | Negative | 868413 - 869933 | 54108.1 |
| lps export abc transporter permease lptf | DEH80_03970 | Not Available | Positive | 870156 - 871250 | 39816.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
