Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase subunit sigma-24 | DEH80_03670 | Not Available | Negative | 801631 - 802239 | 22619.2 |
| hypothetical protein | DEH80_03675 | Not Available | Negative | 802323 - 802844 | 17901.2 |
| oligoendopeptidase f | DEH80_03680 | Not Available | Negative | 802849 - 804801 | 73206.7 |
| phosphoribosylamine--glycine ligase | DEH80_03685 | Not Available | Positive | 804844 - 806136 | 43901.2 |
| hypothetical protein | DEH80_03690 | Not Available | Positive | 806145 - 807095 | 34255.6 |
| hypothetical protein | DEH80_03695 | Not Available | Positive | 807147 - 807635 | 17666.6 |
| trna dihydrouridine synthase dusb | DEH80_03700 | Not Available | Positive | 807676 - 808674 | 36051.4 |
| hypothetical protein | DEH80_03705 | Not Available | Negative | 808683 - 809405 | 25880.8 |
| hypothetical protein | DEH80_03710 | Not Available | Negative | 809380 - 810735 | 49798.5 |
| dna-binding response regulator | DEH80_03715 | Not Available | Negative | 810719 - 811432 | 26017.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
