Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | DEH80_03370 | Not Available | Positive | 743134 - 743745 | 22352.8 |
| pantetheine-phosphate adenylyltransferase | DEH80_03375 | Not Available | Positive | 743742 - 744236 | 17643.1 |
| gamma-glutamyltransferase | DEH80_03380 | Not Available | Positive | 744233 - 745936 | 59813.1 |
| short-chain dehydrogenase | DEH80_03385 | Not Available | Negative | 745941 - 746780 | 29641.4 |
| duf445 domain-containing protein | DEH80_03390 | Not Available | Positive | 746959 - 748236 | 47873.0 |
| dna-formamidopyrimidine glycosylase | DEH80_03395 | Not Available | Negative | 748245 - 749066 | 30306.8 |
| 50s ribosomal protein l33 | DEH80_03400 | Not Available | Negative | 749149 - 749319 | 6518.24 |
| 50s ribosomal protein l28 | DEH80_03405 | Not Available | Negative | 749319 - 749555 | 9154.28 |
| hypothetical protein | DEH80_03410 | Not Available | Negative | 749701 - 751185 | 55091.9 |
| hypothetical protein | DEH80_03415 | Not Available | Negative | 751182 - 751649 | 16105.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
