Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate-5-semialdehyde dehydrogenase | DEH80_03320 | Not Available | Positive | 731443 - 732729 | 45378.3 |
| nicotinate-nicotinamide nucleotide adenylyltransferase | DEH80_03325 | Not Available | Positive | 732760 - 733374 | 22631.3 |
| ribosome silencing factor | DEH80_03330 | Not Available | Positive | 733494 - 733874 | 13558.0 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | DEH80_03335 | Not Available | Positive | 733874 - 734338 | 17459.9 |
| gnat family n-acetyltransferase | DEH80_03340 | Not Available | Negative | 734335 - 734874 | 19497.3 |
| hypothetical protein | DEH80_03345 | Not Available | Positive | 734968 - 735573 | 21142.1 |
| ribonuclease g | DEH80_03350 | Not Available | Positive | 735570 - 737030 | 54267.2 |
| tigr02099 family protein | DEH80_03355 | Not Available | Positive | 737072 - 740875 | 136436.0 |
| hypothetical protein | DEH80_03360 | Not Available | Positive | 740872 - 741711 | 30746.8 |
| metalloprotease tldd | DEH80_03365 | Not Available | Positive | 741708 - 743156 | 50544.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
