Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short chain dehydrogenase | DEH80_03270 | Not Available | Positive | 719552 - 721552 | 73163.2 |
| hypothetical protein | DEH80_03275 | Not Available | Positive | 721652 - 723358 | 59054.5 |
| hypothetical protein | DEH80_03280 | Not Available | Positive | 723386 - 723772 | 14491.7 |
| duf885 domain-containing protein | DEH80_03285 | Not Available | Negative | 723867 - 725690 | 69284.3 |
| 3-deoxy-7-phosphoheptulonate synthase | DEH80_03290 | Not Available | Negative | 725723 - 726796 | 38867.4 |
| hypothetical protein | DEH80_03295 | Not Available | Positive | 727013 - 727993 | 34502.0 |
| adenosylmethionine decarboxylase | DEH80_03300 | Not Available | Positive | 728042 - 728812 | 29757.2 |
| hypothetical protein | DEH80_03305 | Not Available | Positive | 728858 - 729379 | 18718.3 |
| demethoxyubiquinone hydroxylase family protein | DEH80_03310 | Not Available | Negative | 729510 - 730160 | 23198.7 |
| dna polymerase iii subunit delta | DEH80_03315 | Not Available | Positive | 730339 - 731388 | 37861.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
