Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| toxin | DEH80_03220 | Not Available | Negative | 708899 - 709243 | 13113.8 |
| ribonucleotide-diphosphate reductase subunit beta | DEH80_03225 | Not Available | Negative | 709279 - 710457 | 44597.8 |
| ribonucleoside-diphosphate reductase subunit alpha | DEH80_03230 | Not Available | Negative | 710530 - 713529 | 110448.0 |
| mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase | DEH80_03235 | Not Available | Positive | 714022 - 715434 | 51094.7 |
| phosphate--nucleotide phosphotransferase | DEH80_03240 | Not Available | Positive | 715485 - 716354 | 32994.9 |
| hypothetical protein | DEH80_03245 | Not Available | Positive | 716425 - 716634 | 7532.27 |
| duf3096 domain-containing protein | DEH80_03250 | Not Available | Positive | 716656 - 716793 | 4817.41 |
| abc transporter substrate-binding protein | DEH80_03255 | Not Available | Negative | 716815 - 717933 | 39561.1 |
| cysteine desulfuration protein sufe | DEH80_03260 | Not Available | Positive | 718027 - 718443 | 15826.9 |
| hypothetical protein | DEH80_03265 | Not Available | Negative | 718640 - 719347 | 25212.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
