Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DEH80_02915 | Not Available | Positive | 648750 - 649328 | 19936.5 |
| yebc/pmpr family dna-binding transcriptional regulator | DEH80_02920 | Not Available | Positive | 649341 - 650084 | 26730.0 |
| crossover junction endodeoxyribonuclease ruvc | DEH80_02925 | Not Available | Positive | 650032 - 650592 | 19842.1 |
| holliday junction branch migration protein ruva | DEH80_02930 | Not Available | Positive | 650589 - 651182 | 20789.5 |
| holliday junction branch migration dna helicase ruvb | DEH80_02935 | Not Available | Positive | 651190 - 652236 | 37915.6 |
| beta-aspartyl-peptidase | DEH80_02940 | Not Available | Negative | 652346 - 653254 | 31684.8 |
| tol-pal system-associated acyl-coa thioesterase | DEH80_02945 | Not Available | Positive | 653340 - 653750 | 15641.4 |
| protein tolq | DEH80_02950 | Not Available | Positive | 653747 - 654457 | 25966.6 |
| protein tolr | DEH80_02955 | Not Available | Positive | 654460 - 654891 | 15336.6 |
| cell envelope integrity protein tola | DEH80_02960 | Not Available | Positive | 654940 - 655941 | 37703.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
