Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme exporter protein ccmd | DEH80_02865 | Not Available | Positive | 636930 - 637094 | 6048.03 |
| cytochrome c maturation protein ccme | DEH80_02870 | Not Available | Positive | 637084 - 637536 | 16093.2 |
| c-type cytochrome biogenesis protein ccmf | DEH80_02875 | Not Available | Positive | 637533 - 639485 | 71016.0 |
| dsbe family thiol:disulfide interchange protein | DEH80_02880 | Not Available | Positive | 639482 - 640021 | 19828.0 |
| cytochrome c-type biogenesis protein ccmh | DEH80_02885 | Not Available | Positive | 640021 - 640458 | 16823.5 |
| c-type cytochrome biogenesis protein ccmi | DEH80_02890 | Not Available | Positive | 640455 - 641642 | 42157.2 |
| utp--glucose-1-phosphate uridylyltransferase | DEH80_02895 | Not Available | Positive | 641812 - 642711 | 32950.6 |
| 2-oxoglutarate dehydrogenase e1 component | DEH80_02900 | Not Available | Positive | 643080 - 645941 | 106999.0 |
| dihydrolipoamide succinyltransferase | DEH80_02905 | Not Available | Positive | 645993 - 647249 | 45105.4 |
| dihydrolipoyl dehydrogenase | DEH80_02910 | Not Available | Positive | 647310 - 648749 | 50993.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
