Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioesterase | DEH80_02715 | Not Available | Positive | 612218 - 612661 | 16880.8 |
| hypothetical protein | DEH80_02720 | Not Available | Negative | 612688 - 613161 | 17287.7 |
| adenylosuccinate lyase | DEH80_02725 | Not Available | Negative | 613198 - 614565 | 50565.6 |
| aspartate ammonia-lyase | DEH80_02730 | Not Available | Positive | 614781 - 616163 | 48850.6 |
| hypothetical protein | DEH80_02735 | Not Available | Negative | 616236 - 618218 | 66724.0 |
| disulfide bond formation protein b | DEH80_02740 | Not Available | Positive | 618381 - 618893 | 17638.1 |
| putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase | DEH80_02745 | Not Available | Positive | 618890 - 619372 | 17189.4 |
| malate synthase a | DEH80_02750 | Not Available | Positive | 619536 - 621137 | 59600.4 |
| lysr family transcriptional regulator | DEH80_02755 | Not Available | Negative | 621172 - 622110 | 35100.4 |
| isocitrate lyase | DEH80_02760 | Not Available | Positive | 622327 - 623922 | 59280.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
