Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DEH80_02515 | Not Available | Positive | 568647 - 569222 | 21211.4 |
| hypothetical protein | DEH80_02520 | Not Available | Positive | 569168 - 569947 | 27324.9 |
| alanine transaminase | DEH80_02525 | Not Available | Positive | 570577 - 571773 | 44729.8 |
| homoserine dehydrogenase | DEH80_02530 | Not Available | Positive | 571770 - 573071 | 44864.9 |
| threonine synthase | DEH80_02535 | Not Available | Positive | 573064 - 574182 | 38671.1 |
| single-stranded-dna-specific exonuclease recj | DEH80_02540 | Not Available | Positive | 574179 - 575876 | 60817.7 |
| hypothetical protein | DEH80_02545 | Not Available | Negative | 575888 - 579031 | 113673.0 |
| cysteine desulfurase csda | DEH80_02550 | Not Available | Negative | 579133 - 580365 | 44259.6 |
| fe-s cluster assembly protein sufd | DEH80_02555 | Not Available | Negative | 580371 - 581624 | 45505.8 |
| fe-s cluster assembly atpase sufc | DEH80_02560 | Not Available | Negative | 581624 - 582373 | 26912.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
