Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-8-phosphooctulonate synthase | DEH80_02465 | Not Available | Positive | 561158 - 561991 | 29985.1 |
| phosphopyruvate hydratase | DEH80_02470 | Not Available | Positive | 562054 - 563340 | 45352.6 |
| cell division protein ftsb | DEH80_02475 | Not Available | Positive | 563350 - 563625 | 10205.3 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | DEH80_02480 | Not Available | Positive | 563655 - 564335 | 24312.0 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | DEH80_02485 | Not Available | Positive | 564335 - 564808 | 16463.9 |
| trna pseudouridine(13) synthase trud | DEH80_02490 | Not Available | Positive | 564805 - 565824 | 37381.6 |
| tetr/acrr family transcriptional regulator | DEH80_02495 | Not Available | Positive | 565864 - 566502 | 24048.7 |
| dna mismatch repair protein muts | DEH80_02500 | Not Available | Negative | 566559 - 567167 | 22354.4 |
| 5'/3'-nucleotidase sure | DEH80_02505 | Not Available | Positive | 567166 - 567918 | 26750.8 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | DEH80_02510 | Not Available | Positive | 567963 - 568589 | 23050.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
