Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DEH80_02415 | Not Available | Negative | 548946 - 550229 | 45055.0 |
| Trna-asn | Not Available | Not Available | Positive | 550412 - 550487 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 550857 - 550933 | Not Available |
| peptide abc transporter atp-binding protein | DEH80_02430 | Not Available | Negative | 550978 - 551715 | 26479.1 |
| abc transporter permease | DEH80_02435 | Not Available | Negative | 551712 - 552653 | 34073.8 |
| amino acid abc transporter substrate-binding protein | DEH80_02440 | Not Available | Negative | 552650 - 553453 | 30382.6 |
| dna polymerase iii subunit alpha | DEH80_02445 | Not Available | Positive | 553596 - 557111 | 128535.0 |
| acetyl-coa carboxylase carboxyl transferase subunit alpha | DEH80_02450 | Not Available | Positive | 557225 - 558187 | 35524.0 |
| trna lysidine(34) synthetase tils | DEH80_02455 | Not Available | Positive | 558162 - 559448 | 47446.9 |
| ctp synthetase | DEH80_02460 | Not Available | Positive | 559527 - 561161 | 60559.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
