Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DEH80_02365 | Not Available | Negative | 539490 - 540461 | 35121.1 |
| type iv pilus modification protein pilv | DEH80_02370 | Not Available | Negative | 540458 - 541054 | 20602.8 |
| hypothetical protein | DEH80_02375 | Not Available | Negative | 541048 - 541617 | 20954.8 |
| Trna-thr | Not Available | Not Available | Positive | 541909 - 541984 | Not Available |
| aspartate aminotransferase family protein | DEH80_02385 | Not Available | Positive | 542008 - 543240 | 43119.6 |
| gnat family n-acetyltransferase | DEH80_02390 | Not Available | Negative | 543251 - 543715 | 17034.2 |
| n-succinylarginine dihydrolase | DEH80_02395 | Not Available | Negative | 543712 - 545043 | 47930.5 |
| succinylglutamate-semialdehyde dehydrogenase | DEH80_02400 | Not Available | Negative | 545044 - 546522 | 52073.9 |
| arginine n-succinyltransferase | DEH80_02405 | Not Available | Negative | 546562 - 547587 | 37897.2 |
| hypothetical protein | DEH80_02410 | Not Available | Negative | 547584 - 548897 | 46521.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
