Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate 5-kinase | DEH80_02315 | Not Available | Positive | 528601 - 529716 | 38649.4 |
| 30s ribosomal protein s20 | DEH80_02320 | Not Available | Negative | 529793 - 530053 | 9521.64 |
| murein biosynthesis integral membrane protein murj | DEH80_02325 | Not Available | Positive | 530191 - 531777 | 55614.6 |
| bifunctional riboflavin kinase/fad synthetase | DEH80_02330 | Not Available | Positive | 531788 - 532711 | 34165.4 |
| signal peptidase ii | DEH80_02335 | Not Available | Positive | 532719 - 533210 | 18519.8 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | DEH80_02340 | Not Available | Positive | 533223 - 534158 | 33743.9 |
| pilus assembly protein pile | DEH80_02345 | Not Available | Negative | 534160 - 534621 | 16271.2 |
| hypothetical protein | DEH80_02350 | Not Available | Positive | 534644 - 535690 | 36364.8 |
| hypothetical protein | DEH80_02355 | Not Available | Negative | 535703 - 538984 | 116079.0 |
| hypothetical protein | DEH80_02360 | Not Available | Negative | 538981 - 539487 | 17242.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
