Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrolipoyl dehydrogenase | DEH80_02110 | Not Available | Negative | 484246 - 485643 | 48506.7 |
| branched-chain alpha-keto acid dehydrogenase subunit e2 | DEH80_02115 | Not Available | Negative | 485640 - 486965 | 46578.8 |
| alpha-ketoacid dehydrogenase subunit beta | DEH80_02120 | Not Available | Negative | 486966 - 487982 | 37198.5 |
| 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alpha | DEH80_02125 | Not Available | Negative | 487979 - 489205 | 45554.8 |
| alkyl/aryl-sulfatase | DEH80_02130 | Not Available | Positive | 489579 - 491402 | 67329.7 |
| hypothetical protein | DEH80_02135 | Not Available | Positive | 491531 - 492940 | 50467.6 |
| dna polymerase iii subunit gamma/tau | DEH80_02145 | Not Available | Positive | 493282 - 495165 | 67139.0 |
| ybab/ebfc family nucleoid-associated protein | DEH80_02150 | Not Available | Positive | 495186 - 495509 | 11787.2 |
| recombination protein recr | DEH80_02155 | Not Available | Positive | 495532 - 496125 | 21338.6 |
| 4a-hydroxytetrahydrobiopterin dehydratase | DEH80_02160 | Not Available | Negative | 496145 - 496486 | 12310.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
