Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase | DEH80_01860 | Not Available | Negative | 421594 - 422559 | 33915.8 |
| sulfate adenylyltransferase | DEH80_01865 | Not Available | Negative | 422571 - 423752 | 43250.7 |
| adenylyl-sulfate kinase | DEH80_01870 | Not Available | Negative | 423792 - 424409 | 22641.9 |
| lysr family transcriptional regulator | DEH80_01875 | Not Available | Positive | 424519 - 425415 | 32165.8 |
| dihydroneopterin aldolase | DEH80_01880 | Not Available | Positive | 425406 - 427118 | 62357.4 |
| Trna-val | Not Available | Not Available | Positive | 427178 - 427254 | Not Available |
| metal-binding protein | DEH80_01890 | Not Available | Positive | 427539 - 427784 | 9108.97 |
| choline kinase | DEH80_01895 | Not Available | Positive | 427813 - 428847 | 38251.7 |
| thioredoxin peroxidase | DEH80_01900 | Not Available | Negative | 428996 - 429535 | 20096.9 |
| flavodoxin | DEH80_01905 | Not Available | Negative | 429532 - 430146 | 22603.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
