Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| circadian clock protein kaic | DEH80_01810 | Not Available | Negative | 408960 - 410405 | 52105.1 |
| hypothetical protein | DEH80_01815 | Not Available | Negative | 410548 - 412560 | 71112.2 |
| hypothetical protein | DEH80_01820 | Not Available | Positive | 412864 - 413289 | 15104.0 |
| efflux transporter periplasmic adaptor subunit | DEH80_01825 | Not Available | Positive | 413349 - 414590 | 44917.1 |
| abc transporter atp-binding protein | DEH80_01830 | Not Available | Positive | 414601 - 415305 | 25788.8 |
| abc transporter atp-binding protein | DEH80_01835 | Not Available | Positive | 415311 - 416618 | 48435.6 |
| abc transporter permease | DEH80_01840 | Not Available | Positive | 416630 - 417835 | 43804.5 |
| sigma-54-dependent fis family transcriptional regulator | DEH80_01845 | Not Available | Positive | 417894 - 419234 | 49063.3 |
| atp-binding protein | DEH80_01850 | Not Available | Positive | 419243 - 420568 | 48216.5 |
| short-chain dehydrogenase | DEH80_01855 | Not Available | Negative | 420565 - 421518 | 33926.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
