Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinylglutamate desuccinylase | DEH80_01410 | Not Available | Negative | 320387 - 321421 | 37419.4 |
| hypothetical protein | DEH80_01415 | Not Available | Negative | 321414 - 321878 | 17199.2 |
| lipid kinase | DEH80_01420 | Not Available | Negative | 321847 - 322758 | 32872.1 |
| 30s ribosomal protein s6--l-glutamate ligase | DEH80_01425 | Not Available | Negative | 322784 - 323689 | 32730.8 |
| atp-dependent zinc protease | DEH80_01430 | Not Available | Negative | 323686 - 324156 | 17387.7 |
| hypothetical protein | DEH80_01435 | Not Available | Positive | 324254 - 325636 | 50062.1 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | DEH80_01440 | Not Available | Positive | 325633 - 327498 | 68028.5 |
| addiction module antidote protein, higa family | DEH80_01445 | Not Available | Negative | 327747 - 328037 | 10737.0 |
| plasmid maintenance system killer protein | DEH80_01450 | Not Available | Negative | 328054 - 328344 | 10727.8 |
| helicase | DEH80_01455 | Not Available | Negative | 328459 - 331722 | 122956.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
