Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-54 factor | DEH80_16875 | Not Available | Negative | 3700414 - 3701772 | 49465.9 |
| dna-binding response regulator | DEH80_16880 | Not Available | Negative | 3702073 - 3702837 | 27406.2 |
| hypothetical protein | DEH80_16885 | Not Available | Negative | 3702855 - 3703361 | 19119.5 |
| hypothetical protein | DEH80_16890 | Not Available | Negative | 3703392 - 3703673 | 10275.8 |
| flagellar export chaperone flis | DEH80_16895 | Not Available | Negative | 3703670 - 3704080 | 14652.4 |
| flagellar cap protein | DEH80_16900 | Not Available | Negative | 3704096 - 3705475 | 47532.8 |
| hypothetical protein | DEH80_16905 | Not Available | Negative | 3705523 - 3705879 | 12873.2 |
| flagellin | DEH80_16910 | Not Available | Negative | 3706003 - 3707145 | 38556.5 |
| hypothetical protein | DEH80_16915 | Not Available | Positive | 3707555 - 3711508 | 146117.0 |
| hypothetical protein | DEH80_16920 | Not Available | Positive | 3711505 - 3713310 | 66060.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
