Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Chromatiales
Family
Oceanococcaceae
Genus
Abyssibacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Chromatiales |
| Family | Oceanococcaceae |
| Genus | Abyssibacter |
| Species | Abyssibacter profundi |
| Strain | OUC007 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
689701 bp
Thymine Count
689008 bp
Guanine Count
1184685 bp
Cytosine Count
1177969 bp
Genome Length
3741513 bp
Protein-coding Genes
3309 genes
Non-Coding Genes
83 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ligase-associated dna damage response exonuclease | DEH80_16170 | Not Available | Positive | 3527007 - 3527999 | 36622.7 |
| atp-dependent dna ligase | DEH80_16175 | Not Available | Positive | 3527996 - 3529594 | 59729.4 |
| ligase-associated dna damage response dexh box helicase | DEH80_16180 | Not Available | Positive | 3529591 - 3532002 | 88902.7 |
| ligase-associated dna damage response endonuclease pdem | DEH80_16185 | Not Available | Positive | 3531974 - 3532672 | 25865.0 |
| hypothetical protein | DEH80_16190 | Not Available | Negative | 3532650 - 3533081 | 15471.2 |
| hypothetical protein | DEH80_16195 | Not Available | Positive | 3533245 - 3535239 | 73606.8 |
| hypothetical protein | DEH80_16200 | Not Available | Positive | 3535221 - 3535769 | 19799.8 |
| hypothetical protein | DEH80_16205 | Not Available | Positive | 3535699 - 3537345 | 59340.2 |
| hypothetical protein | DEH80_16210 | Not Available | Positive | 3537345 - 3538304 | 35381.8 |
| molybdopterin molybdenumtransferase moea | DEH80_16215 | Not Available | Negative | 3538301 - 3539473 | 40690.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
